Cookies help us deliver our services. By using our services, you agree to our use of cookies. More information

Difference between revisions of "Gnaiger 1994 BTK"

From Bioblast
Line 21: Line 21:


== Preface ==  
== Preface ==  
* Margreiter R, Innsbruck. p 13.
Margreiter R, Innsbruck: p 13
* Trends in Bioenergetics. An Introduction. Gnaiger E, Gellerich FN, Innsbruck. p 14.
 
* "German Ideology" as seen by Erwin Schrödinger in Letters to Hans Thirring. From Their Correspondence (1946-1949). Oberkofler G, Goller P. Innsbruck. p 19.
Gnaiger E, Gellerich FN, Innsbruck: p 14
: Trends in Bioenergetics. An Introduction.  
Oberkofler G, Goller P. Innsbruck: p 19
: "German Ideology" as seen by Erwin Schrödinger in Letters to Hans Thirring. From Their Correspondence (1946-1949).  


== Part 1. What is Negative Entropy? From World Views to Bioenergetics ==
== Part 1. What is Negative Entropy? From World Views to Bioenergetics ==
Götschl J. Graz. p 23.
Götschl J. Graz: p 23
* Erwin Schrödinger's World View. The Role of Physics and Biology in his Philosophical System.
: Erwin Schrödinger's World View. The Role of Physics and Biology in his Philosophical System.
Wagensberg J. Barcelona. p 32.
Wagensberg J. Barcelona: p 32
* Science, Art and Revelation.
: Science, Art and Revelation.
Azzone GF. Padova. p 38.
Azzone GF. Padova: p 38
* Negentropy and Historical Arrow of Time - Thermodynamical and Informational Aspects of the Darwinian Revolution.  
: Negentropy and Historical Arrow of Time - Thermodynamical and Informational Aspects of the Darwinian Revolution.  
Lantos CP. Buenos Aires. p 45.
Lantos CP. Buenos Aires: p 45
* Negative Entropy: Another Approach.  
: Negative Entropy: Another Approach.  
Welch GR. New Orleans. p 48.
Welch GR. New Orleans: p 48
* Schrödinger's What is Life?: The Biophysical Legacy 50 Years Later.
: Schrödinger's What is Life?: The Biophysical Legacy 50 Years Later.
Ho MW. London. p 50.
Ho MW. London: p 50
* What is Schrödinger's Negentropy?
: What is Schrödinger's Negentropy?
Gnaiger E. Innsbruck. p 62.
Gnaiger E. Innsbruck: p 62
* Negative Entropy for Living Systems. Controversy between Nobel Laureates Schrödinger, Pauling and Perutz.
: Negative Entropy for Living Systems. Controversy between Nobel Laureates Schrödinger, Pauling and Perutz.
Kushmerick MJ. Seattle. p 71.
Kushmerick MJ. Seattle: p 71
* A Paradigm for Energy Balance in Muscle Function.  
: A Paradigm for Energy Balance in Muscle Function.  
Lloyd D. Cardiff. p 77.
Lloyd D. Cardiff: p 77
* A Controlled Chaotic Attractor Controls Life.  
: A Controlled Chaotic Attractor Controls Life.  
Azzone GF. Padova. p 81.
Azzone GF. Padova: p 81
* Disease as Instability, Error and Entropy.  
: Disease as Instability, Error and Entropy.  


== Part 2. Control and Regulation: Theory, Models, and Experi­ment ==
== Part 2. Control and Regulation: Theory, Models, and Experi­ment ==
* The Macro- and Microworld of Control Theory. Kholodenko BN, Westerhoff HV, Cascante M. Moscow, Amsterdam. Barcelona. p 88.
Kholodenko BN, Westerhoff HV, Cascante M. Moscow, Amsterdam. Barcelona: p 88
* How Should we Quantify Metabolic Regulation? Hofmeyr JHS, Cornish-Bowden A. Stellenbosch, Marseille. p  91.
: The Macro- and Microworld of Control Theory.  
* Control and Regulation: The Best of Both Worlds. Westerhoff HV, Jensen PR, Rohwer JM, Kholo­denko BN. Amsterdam, Lyngby, Moscow. p 95.
Hofmeyr JHS, Cornish-Bowden A. Stellenbosch, Marseille: p  91
* Evolutionary Optimization of Enzymes on the Basis of Kinetic and Thermodynamic Principles. Heinrich R, Klipp E, Stephani A, Wilhelm T. Berlin. p 99.
: How Should we Quantify Metabolic Regulation?
* Detecting Elementary Modes of Functioning in Metabolic Networks. Schuster S, Hilgetag C, Fell DA. Berlin, Oxford. p 103.
Westerhoff HV, Jensen PR, Rohwer JM, Kholo­denko BN. Amsterdam, Lyngby, Moscow: p 95
: Control and Regulation: The Best of Both Worlds.  
Heinrich R, Klipp E, Stephani A, Wilhelm T. Berlin: p 99
: Evolutionary Optimization of Enzymes on the Basis of Kinetic and Thermodynamic Principles.  
Schuster S, Hilgetag C, Fell DA. Berlin, Oxford: p 103
: Detecting Elementary Modes of Functioning in Metabolic Networks.  




== Part 3. Coupling and Mechanisms in the Regulation of Electron, ATP and Ion Fluxes ==
== Part 3. Coupling and Mechanisms in the Regulation of Electron, ATP and Ion Fluxes ==
* Leaks and Slips during Mitochondrial Electron Trans­fer. Luvisetto S, Canton M, Schmehl I, Azzone GF. Padova. p 122.
Luvisetto S, Canton M, Schmehl I, Azzone GF. Padova: p 122
* Experimental Discrimination between Proton Leak and Redox Slip during Mitochondrial Electron Transport. Brand MD, Chien LF, Diolez PH. Cambridge, Bordeaux. p 125.
: Leaks and Slips during Mitochondrial Electron Trans­fer.  
* Permeability of the Inner Mitochondrial Membrane and Respiration. Canton M, Luvisetto S, Schmehl I, Azzone GF. Padova. p 129.
Brand MD, Chien LF, Diolez PH. Cambridge, Bordeaux: p 125
* The Uncoupling Mechanism of the Anesthetic Bupivacaine. Schmehl I, Canton M, Luvisetto S, Azzone GF. Padova. p 133.
: Experimental Discrimination between Proton Leak and Redox Slip during Mitochondrial Electron Transport.  
* Influence of the Mechanism of Change in ATP Synthase-ATPase. Stoichiometry on the Control of Oxidative Phosphorylation in situ. Leverve X, Fontaine E, Espié P, Keriel C, Guérin B, Rigoulet M. Grenoble, Bordeaux. p 137.
Canton M, Luvisetto S, Schmehl I, Azzone GF. Padova: p 129
* ATP Synthesis in Permeabilized Cells: Assessment of the ATP/O Ratios In Situ. Ouhabi R, Boue-Grabot M, Mazat JP. Bordeaux. p 141.
: Permeability of the Inner Mitochondrial Membrane and Respiration.  
* Permeabilized Spheroplasts as a Tool for Studying the Mechanistic Stoichiometry of Yeast Oxidative Phosphory­la­tion.  Fitton V, Ouhabi R, Guérin B, Rigoulet M. Bordeaux. p 145.
Schmehl I, Canton M, Luvisetto S, Azzone GF. Padova: p 133
* Investigations upon the Effect of Monovalent Cations on Oxidative Phosphorylation in Yeast Mitochondria. Manon S, Roucou X, Guérin M. Bordeaux. p 150.
: The Uncoupling Mechanism of the Anesthetic Bupivacaine.  
 
Leverve X, Fontaine E, Espié P, Keriel C, Guérin B, Rigoulet M. Grenoble, Bordeaux: p 137
* Can Mitochondria Sequester Calcium from Physiological Calcium Pulses?
: Influence of the Mechanism of Change in ATP Synthase-ATPase. Stoichiometry on the Control of Oxidative Phosphorylation in situ.
G. Sparagna, K.K. Gunter, S.-S. Sheu, T.E. Gunter. Rochester 154
Ouhabi R, Boue-Grabot M, Mazat JP. Bordeaux. p 141
 
: ATP Synthesis in Permeabilized Cells: Assessment of the ATP/O Ratios In Situ.  
* Mitochondrial Calcium Spiking: The Physiological Face of Permeability Transition?
Fitton V, Ouhabi R, Guérin B, Rigoulet M. Bordeaux. p 145.
F. Ichas, L.S. Jouaville, S.S. Sidash, J.-P. Mazat, E.L. Holmuhamedov. Bordeaux, Pushchino, Kalamazoo 159
: Permeabilized Spheroplasts as a Tool for Studying the Mechanistic Stoichiometry of Yeast Oxidative Phosphory­la­tion.   
 
Manon S, Roucou X, Guérin M. Bordeaux: p 150
* Developmental regulation of Na+,K+- and Ca2+-ATPases in muscle.
: Investigations upon the Effect of Monovalent Cations on Oxidative Phosphorylation in Yeast Mitochondria.
M.J. Dauncey, T. Clausen, A.P. Harrison. Cambridge, Århus 163
Sparagna G, Gunter KK, Sheu SS, Gunter TE. Rochester: p 154
 
: Can Mitochondria Sequester Calcium from Physiological Calcium Pulses?
* What is controlling the cell membrane potential?
Ichas F, Jouaville LS , Sidash, SS J.-P. Mazat, E.L. Holmuhamedov. Bordeaux, Pushchino, Kalamazoo: p 159
J. Siegenbeek van Heukelom et al. Amsterdam, Moscow 169
: Mitochondrial Calcium Spiking: The Physiological Face of Permeability Transition.
Dauncey MJ, Clausen T, Harrison AP. Cambridge, Århus: p 163
: Developmental regulation of Na+,K+- and Ca2+-ATPases in muscle.
Siegenbeek van Heukelom J et al. Amsterdam, Moscow: p 169
: What is controlling the cell membrane potential?




Revision as of 18:36, 2 July 2014

Publications in the MiPMap
Gnaiger E, Gellerich FN, Wyss M (1994) What is Controlling Life? 50 years after Erwin Schrödinger's What is Life? Modern Trends in BiothermoKinetics 3, Innsbruck Univ Press, 336 pp.

» Open Access-BTK 1994

Gnaiger E, Gellerich FN, Wyss M (1994) Innsbruck Univ Press

Abstract: Erwin Schrödinger's 'What is Life?' is one of the most influential books of the last century in the biological sciences. It continues to provoke discussions and stimulate interdisciplinary developments in biophysics. Starting with reflections on Schrödinger's famous account of negative entropy in living systems, an international group of scientists presents the latest advancements on the dynamics and control of metabolic processes. This volume of Modern Trends in BioThermoKinetics develops for the first time the explicit link between thermodynamics, metabolic control, bioenergetics and clinical applications.


‱ O2k-Network Lab: AT_Innsbruck_Gnaiger E


Labels: MiParea: Respiration, mt-Awareness 




Coupling state: OXPHOS 

HRR: Oxygraph-2k, Theory 


CONTENTS: Full Papers

  • OROBOROS Oxygraph applications

Preface

Margreiter R, Innsbruck: p 13

Gnaiger E, Gellerich FN, Innsbruck: p 14

Trends in Bioenergetics. An Introduction.

Oberkofler G, Goller P. Innsbruck: p 19

"German Ideology" as seen by Erwin Schrödinger in Letters to Hans Thirring. From Their Correspondence (1946-1949).

Part 1. What is Negative Entropy? From World Views to Bioenergetics

Götschl J. Graz: p 23

Erwin Schrödinger's World View. The Role of Physics and Biology in his Philosophical System.

Wagensberg J. Barcelona: p 32

Science, Art and Revelation.

Azzone GF. Padova: p 38

Negentropy and Historical Arrow of Time - Thermodynamical and Informational Aspects of the Darwinian Revolution.

Lantos CP. Buenos Aires: p 45

Negative Entropy: Another Approach.

Welch GR. New Orleans: p 48

Schrödinger's What is Life?: The Biophysical Legacy 50 Years Later.

Ho MW. London: p 50

What is Schrödinger's Negentropy?

Gnaiger E. Innsbruck: p 62

Negative Entropy for Living Systems. Controversy between Nobel Laureates Schrödinger, Pauling and Perutz.

Kushmerick MJ. Seattle: p 71

A Paradigm for Energy Balance in Muscle Function.

Lloyd D. Cardiff: p 77

A Controlled Chaotic Attractor Controls Life.

Azzone GF. Padova: p 81

Disease as Instability, Error and Entropy.

Part 2. Control and Regulation: Theory, Models, and Experi­ment

Kholodenko BN, Westerhoff HV, Cascante M. Moscow, Amsterdam. Barcelona: p 88

The Macro- and Microworld of Control Theory.

Hofmeyr JHS, Cornish-Bowden A. Stellenbosch, Marseille: p 91

How Should we Quantify Metabolic Regulation?

Westerhoff HV, Jensen PR, Rohwer JM, Kholo­denko BN. Amsterdam, Lyngby, Moscow: p 95

Control and Regulation: The Best of Both Worlds.

Heinrich R, Klipp E, Stephani A, Wilhelm T. Berlin: p 99

Evolutionary Optimization of Enzymes on the Basis of Kinetic and Thermodynamic Principles.

Schuster S, Hilgetag C, Fell DA. Berlin, Oxford: p 103

Detecting Elementary Modes of Functioning in Metabolic Networks.


Part 3. Coupling and Mechanisms in the Regulation of Electron, ATP and Ion Fluxes

Luvisetto S, Canton M, Schmehl I, Azzone GF. Padova: p 122

Leaks and Slips during Mitochondrial Electron Trans­fer.

Brand MD, Chien LF, Diolez PH. Cambridge, Bordeaux: p 125

Experimental Discrimination between Proton Leak and Redox Slip during Mitochondrial Electron Transport.

Canton M, Luvisetto S, Schmehl I, Azzone GF. Padova: p 129

Permeability of the Inner Mitochondrial Membrane and Respiration.

Schmehl I, Canton M, Luvisetto S, Azzone GF. Padova: p 133

The Uncoupling Mechanism of the Anesthetic Bupivacaine.

Leverve X, Fontaine E, Espié P, Keriel C, Guérin B, Rigoulet M. Grenoble, Bordeaux: p 137

Influence of the Mechanism of Change in ATP Synthase-ATPase. Stoichiometry on the Control of Oxidative Phosphorylation in situ.

Ouhabi R, Boue-Grabot M, Mazat JP. Bordeaux. p 141

ATP Synthesis in Permeabilized Cells: Assessment of the ATP/O Ratios In Situ.

Fitton V, Ouhabi R, Guérin B, Rigoulet M. Bordeaux. p 145.

Permeabilized Spheroplasts as a Tool for Studying the Mechanistic Stoichiometry of Yeast Oxidative Phosphory­la­tion.

Manon S, Roucou X, Guérin M. Bordeaux: p 150

Investigations upon the Effect of Monovalent Cations on Oxidative Phosphorylation in Yeast Mitochondria.

Sparagna G, Gunter KK, Sheu SS, Gunter TE. Rochester: p 154

Can Mitochondria Sequester Calcium from Physiological Calcium Pulses?

Ichas F, Jouaville LS , Sidash, SS J.-P. Mazat, E.L. Holmuhamedov. Bordeaux, Pushchino, Kalamazoo: p 159

Mitochondrial Calcium Spiking: The Physiological Face of Permeability Transition.

Dauncey MJ, Clausen T, Harrison AP. Cambridge, Århus: p 163

Developmental regulation of Na+,K+- and Ca2+-ATPases in muscle.

Siegenbeek van Heukelom J et al. Amsterdam, Moscow: p 169

What is controlling the cell membrane potential?


Part 4. The Microenvironment of Mitochondria and Cells: Diffusion Gradients, Shuttles and Signals

  • ADP Diffusion Gradients and Metabolic Oscillatory Signals to Mitochondria in Heart and Liver Cells.

V.A. Saks, E.V. Vasilyeva, Z.A. Khuchua, Y.O. Belikova, M.K. Aliev, T. Kesvatera, T. Tiivel, K. Anflous, R. Ventura-Clapier, Ch. Keriel, E. Fontaine, X. Leverve. Tallinn, Moscow, Paris, Grenoble 178

  • Effect of Macromolecules on ADP-Transport into Mitochondria.

F.N. Gellerich, F.D. Laterveer, E. Gnaiger, K. Nicolay. Utrecht, Innsbruck download pdf 181*

  • Macromolecules Increase the Channeling of ADP from Mitochondrially Associated Hexokinase to the Mitochondrial Matrix.

F.D. Laterveer, F.N. Gellerich, E. Gnaiger, K. Nicolay. Utrecht, Innsbruck download pdf 186*

  • How does Oxygen Pressure Control Oxygen Flux in Isolated Mitochondria? A Methodological Approach by High-Resolution Respirometry and Digital Data Analysis. G. MĂ©ndez, E. Gnaiger. Innsbruck, Buenos Aires download pdf 191*
  • Determination of Creatine Kinase Fluxes with Purified Creatine Kinase and Isolated Mitochondria using 31P Nuclear Magnetic Resonance.

S. Soboll, A. Conrad, M. Gruwel. DĂŒsseldorf 195

  • Oscillations of Intracellular pH or High Energy Phosphate Content Cannot be Detected by Gated NMR during the Cardiac Cycle of an Isovolumic Perfused Rat Heart.

J.A. Hoerter, B. Gillet, P. Mateo, P. Lechene, J.-C. Beloeil. Chatenay Malabry, Gifs/Yvette 199


Part 5. The Impact of Bioenergetics on Cellular, Physiological and Biotechnological Processes

  • Chemical Forces in the Cell: Calculations for the ATP System.

E. Gnaiger, M. Wyss. Innsbruck download pdf 207

  • The Flow-Force Relation of Oxidative Phosphorylation in Human Forearm Muscle is Sigmoidal.

J.A.L. Jeneson, S.A. Jubrias, M.J. Kushmerick. Utrecht, Seattle 213

  • Muscular Contraction, Dissipation and Schrödinger's Negative Entropy.

J. Mejsnar, F. MarsĂ­k. Praha 215

  • Modelling of Oxidative Phosphorylation in E. coli.

P.R. Jensen, J.M. Rohwer, O. Michelsen, H.V. Westerhoff. Lyngby, Amsterdam 218

  • Do Oscillations Control the Bacterial Cell Cycle?

I. Fishov. Beer-Sheva 221

  • A Thermochemical Study of the Production of Lactate by Glutaminolysis and Glycolysis in Mouse Macrophage Hybridoma Cells.

R.B. Kemp, S. Hoare, M. Schmalfeldt, C.M.C. Bridge, P.M. Evans, E. Gnaiger. Aberystwyth, Innsbruck. 226

  • Catabolic Capacity of Carbon- or Nitrogen-Starved Cultures of Saccharomyces cerevisiae.

C. Larsson, A. Nilsson, L Gustafsson. Göteborg 232

  • Energy Allocation and Material Flux in Fish Hepatocytes under Stress. G. Krumschnabel, W. Wieser. Innsbruck 238
  • Carbon Flux in Lysine Producing Strain Corynebacterium glutamicum MH20-22B: Analysis by 13C-NMR of Amino Acids and Metabolite Balancing.

A. Marx, A.A. de Graaf, W. Wiechert, L. Eggeling, H. Sahm. JĂŒlich 240

  • Remarks on Biocalorimetry and Biothermodynamics Aimed at Characterization of the Physiological State.

B. Zentgraf. Furtwangen 244


== Part 6. The Impact of Bioenergetics on Clinical and Pathologi­cal Problems.

  • The Permeability Transition Pore. Pathophysiology of a Cyclosporin A-sensitive Mitochondrial Channel.

V. Petronilli, A. Nicolli, P. Costantini, R. Colonna, P. Bernardi. Padova 259

  • Mitochondrial Function in the Atrial Appendage of the Human Heart. Characterization by High-Resolution Respirometry.

F.N. Gellerich, R. Steinlechner, M. Wyss, T. Eberl, L.C. MĂŒller, D. Skladal, W. Sperl, O. Dapunt, R. Margreiter, E. Gnaiger. Innsbruck download pdf 263*

  • Preservation of Mitochondrial Functions in Human Skeletal Muscle during Storage in High Energy Preservation Solution (HEPS).

D. Skladal, W. Sperl, R. Schranzhofer, M. Krismer, E. Gnaiger, R. Margreiter, F.N. Gellerich. Innsbruck download pdf 268*

  • Application of Control Analysis to the Study of Metabolic Diseases in Mitochondria. Metabolic Expression of Mitochondrial DNA Mutations.

J.-P. Mazat, T. Letellier, M. Malgat, S. Jouaville, R. Morkuniene. Bordeaux, Kaunas 272

  • Change in Flux Control Coefficient of Cytochrome c Oxidase in Copper Deficient Mottled Brindled Mice.

A.V. Kuznetsov, J.F. Clark, K. Winkler, W.S. Kunz. Magdeburg, Oxford download pdf 275*

  • Insulin-Dependent Diabetes Mellitus in MELAS-Mitochondriopathy: Discussion of Possible Causal Relations.

K. Oexle, J. Oberle, C. HĂŒbner 278

  • Simulation of the Flow-Force Relation of Oxidative Phosphor­ylation in Complex I Deficiency.

J.A.L. Jeneson, H.V. Westerhoff. Utrecht, Amsterdam 280

  • Oxygen Dependence of Cellular Respiration in Endothelial Cells: A Sensitive Toxicological Test.

R. Steinlechner, T. Eberl, R. Margreiter, E. Gnaiger. Innsbruck download pdf 283*

  • Endothelial Cell Cultures as a Model for Organ Preservation Studies.

T. Eberl, R. Steinlechner, W. Salvenmoser, B. Abendstein, M. Rhomberg, H. Schröcksnadel, T. Schmid, E. Gnaiger, R. Margreiter. Innsbruck download pdf 288*

  • The Effect of 2-Chlorodeoxyadenosine on Endogenous Respiration of a Human Lymphoma Cell line (U-937).

A. Knoblechner, R. Steinlechner, M. Schirmer, F.N. Gellerich, R. Margreiter, G. Konwalinka, E. Gnaiger. Innsbruck download pdf 294*


Part 7. Computer Software for Bioenergetics and Metabolic Control Analysis

  • Simultaneous Estimates of Single-Enzyme Kinetic Parameters for Multi-Enzymatic Systems Using Artificial Neural Networks.

P. Mendes, D.B. Kell. Aberystwyth 302

  • Design of a Software Framework for Flux Determination by 13C NMR Isotope Labelling Experiments.

W. Wiechert. JĂŒlich 305


Announcements

  • Oroboros. Grinzens-Innsbruck, Austria download pdf 316
  • Acknowledgements for Financial Support 318
  • Index


Subject Index 319

Author Index 325

Addresses of Participants 329

Retrieved from "https://wiki.oroboros.at/index.php?title=Gnaiger_1994_BTK&oldid=63895"
Powered by MediaWiki
Powered by Semantic MediaWiki