Difference between revisions of "SUIT protocol names"
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|abbr=SUITp-Names | |abbr=SUITp-Names | ||
|description=[[File:SUIT-nomenclature.jpg|300px|right|SUIT protocols]] | |description=[[File:SUIT-nomenclature.jpg|300px|right|SUIT protocols]] | ||
The '''SUIT protocol name''' starts with the [[Categories of SUIT protocols |category]] of the SUIT protocol, and separates the category with an underline dash from the sequence of titration steps (mark names, #''X'', separated by a space). The [[Marks in DatLab |Marks]] define the section of a [[respiratory state]] in the SUIT protocol. The [[Mark names in DatLab |Mark name]] contains the sequential number and the [[metabolic control variable]], ''X''. The metabolic control variable is the name of the preceding SUIT [[event]]. The [[MitoPedia: SUIT protocols |list of MitoPedia SUIT protocols]] can thus be sorted by the SUIT protocol category (sorting by SUIT protocol name), and by [[Subcategories of SUIT protocols |SUIT protocol subcategory]] which is listed as the abbreviation of the SUIT protocol name. The [[SUIT protocol pattern]] is best illustrated by a [[coupling-pathway control diagram]] | The '''SUIT protocol name''' starts with (i) the [[Categories of SUIT protocols |SUIT category]] which shows the [[ETS substrate types]] applied (controlling ETS pathway types; e.g. S, NS, FNS, FNSGp), independent of the actual sequence of titrations. (ii) A further distinction is provided in the SUIT name by listing in parentheses the [[N-pathway control |N-type substrates]] applied, again independent of the sequence of titrations, e.g. NS(GM), NS(PM), FNSGp(PGM). (iii) A sequentially selected number is added, e.g. SUIT_FNS(PM)01 (see [[Coupling-pathway control diagram]]). | ||
The '''SUIT sequence''' starts with the [[Categories of SUIT protocols |category]] of the SUIT protocol, and separates the category with an underline dash from the sequence of titration steps (mark names, #''X'', separated by a space). The [[Marks in DatLab |Marks]] define the section of a [[respiratory state]] in the SUIT protocol. The [[Mark names in DatLab |Mark name]] contains the sequential number and the [[metabolic control variable]], ''X''. The metabolic control variable is the name of the preceding SUIT [[event]]. The [[MitoPedia: SUIT protocols |list of MitoPedia SUIT protocols]] can thus be sorted by the SUIT protocol category (sorting by SUIT protocol name), and by [[Subcategories of SUIT protocols |SUIT protocol subcategory]] which is listed as the abbreviation of the SUIT protocol name. The [[SUIT protocol pattern]] is best illustrated by a [[coupling-pathway control diagram]]. | |||
|info=[[MiPNet21.06 SUIT RP]] | |info=[[MiPNet21.06 SUIT RP]] | ||
}} | }} | ||
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|mitopedia concept=MiP concept, SUIT concept | |mitopedia concept=MiP concept, SUIT concept | ||
}} | }} | ||
Contributed by [[Gnaiger Erich]] 2016-02-01. | Contributed by [[Gnaiger Erich]] 2016-02-01; edited 2016-09-05. | ||
[[File:SUIT-catg FNSGpCIV.jpg|left|200px]] | [[File:SUIT-catg FNSGpCIV.jpg|left|200px]] |
Revision as of 03:18, 5 September 2016
Description
The SUIT protocol name starts with (i) the SUIT category which shows the ETS substrate types applied (controlling ETS pathway types; e.g. S, NS, FNS, FNSGp), independent of the actual sequence of titrations. (ii) A further distinction is provided in the SUIT name by listing in parentheses the N-type substrates applied, again independent of the sequence of titrations, e.g. NS(GM), NS(PM), FNSGp(PGM). (iii) A sequentially selected number is added, e.g. SUIT_FNS(PM)01 (see Coupling-pathway control diagram).
The SUIT sequence starts with the category of the SUIT protocol, and separates the category with an underline dash from the sequence of titration steps (mark names, #X, separated by a space). The Marks define the section of a respiratory state in the SUIT protocol. The Mark name contains the sequential number and the metabolic control variable, X. The metabolic control variable is the name of the preceding SUIT event. The list of MitoPedia SUIT protocols can thus be sorted by the SUIT protocol category (sorting by SUIT protocol name), and by SUIT protocol subcategory which is listed as the abbreviation of the SUIT protocol name. The SUIT protocol pattern is best illustrated by a coupling-pathway control diagram.
Abbreviation: SUITp-Names
Reference: MiPNet21.06 SUIT RP
MitoPedia concepts:
MiP concept,
SUIT concept
Contributed by Gnaiger Erich 2016-02-01; edited 2016-09-05.